[ Källkod: srst2 ]
Paket: srst2 (0.2.0-9)
Länkar för srst2
Trisquelresurser:
Hämta källkodspaketet srst2:
Ansvarig:
Original Maintainers:
- Debian Med Packaging Team (E-postarkiv)
- Andreas Tille
- Étienne Mollier
Externa resurser:
- Hemsida [katholt.github.io]
Liknande paket:
Short Read Sequence Typing for Bacterial Pathogens
This program is designed to take Illumina sequence data, a MLST database and/or a database of gene sequences (e.g. resistance genes, virulence genes, etc) and report the presence of STs and/or reference genes.
Andra paket besläktade med srst2
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- dep: bowtie2
- ultrafast memory-efficient short read aligner
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- dep: cd-hit
- suite of programs designed to quickly group sequences
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-biopython
- Python3 library for bioinformatics
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- dep: python3-scipy
- scientific tools for Python 3
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- dep: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
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- rec: python3-rpy2
- Python3 interface to the GNU R language and environment (version 2)
också ett virtuellt paket som tillhandahålls av python3-rpy2
Hämta srst2
| Arkitektur | Paketstorlek | Installerad storlek | Filer |
|---|---|---|---|
| amd64 | 61,2 kbyte | 254 kbyte | [filförteckning] |
| arm64 | 61,2 kbyte | 254 kbyte | [filförteckning] |
| ppc64el | 61,2 kbyte | 254 kbyte | [filförteckning] |