[ 原始碼： srst2 ]
套件： srst2 (0.2.0-9)
srst2 的相關超連結
Trisquel 的資源：
下載原始碼套件 srst2：
維護者：
Original Maintainers:
- Debian Med Packaging Team (郵件存檔)
- Andreas Tille
- Étienne Mollier
外部的資源：
- 主頁 [katholt.github.io]
相似套件：
Short Read Sequence Typing for Bacterial Pathogens
This program is designed to take Illumina sequence data, a MLST database and/or a database of gene sequences (e.g. resistance genes, virulence genes, etc) and report the presence of STs and/or reference genes.
其他與 srst2 有關的套件
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- dep: bowtie2
- ultrafast memory-efficient short read aligner
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- dep: cd-hit
- suite of programs designed to quickly group sequences
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-biopython
- Python3 library for bioinformatics
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- dep: python3-scipy
- scientific tools for Python 3
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- dep: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
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- rec: python3-rpy2
- Python3 interface to the GNU R language and environment (version 2)
同時作為一個虛擬套件由這些套件提供： python3-rpy2