[ Source: srst2 ]
Paketti: srst2 (0.2.0-9)
Links for srst2
Trisquel-palvelut:
Imuroi lähdekoodipaketti srst2:
Ylläpitäjä:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Andreas Tille
- Étienne Mollier
External Resources:
- Kotisivu [katholt.github.io]
Samankaltaisia paketteja:
Short Read Sequence Typing for Bacterial Pathogens
This program is designed to take Illumina sequence data, a MLST database and/or a database of gene sequences (e.g. resistance genes, virulence genes, etc) and report the presence of STs and/or reference genes.
Muut pakettiin srst2 liittyvät paketit
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- dep: bowtie2
- ultrafast memory-efficient short read aligner
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- dep: cd-hit
- suite of programs designed to quickly group sequences
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-biopython
- Python3 library for bioinformatics
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- dep: python3-scipy
- scientific tools for Python 3
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- dep: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
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- rec: python3-rpy2
- Python3 interface to the GNU R language and environment (version 2)
myös näennäispaketti, jonka toteuttaa python3-rpy2
Imuroi srst2
| Arkkitehtuuri | Paketin koko | Koko asennettuna | Tiedostot |
|---|---|---|---|
| amd64 | 61.2 kt | 254 kt | [tiedostoluettelo] |
| arm64 | 61.2 kt | 254 kt | [tiedostoluettelo] |
| ppc64el | 61.2 kt | 254 kt | [tiedostoluettelo] |