[ aramo ]
[ Kaynak: ngmlr ]
Paket: ngmlr (0.2.7+git20210816.a2a31fb+dfsg-2)
ngmlr için bağlantılar
Trisquel Kaynakları:
ngmlr Kaynak Paketini İndir:
- [ngmlr_0.2.7+git20210816.a2a31fb+dfsg-2.dsc]
- [ngmlr_0.2.7+git20210816.a2a31fb+dfsg.orig.tar.gz]
- [ngmlr_0.2.7+git20210816.a2a31fb+dfsg-2.debian.tar.xz]
Geliştirici:
Original Maintainers:
- Debian Med Packaging Team (Posta Arşivi)
- Nilesh Patra
Dış Kaynaklar:
- Ana Sayfa [github.com]
Benzer paketler:
CoNvex Gap-cost alignMents for Long Reads
Ngmlr is a long-read mapper designed to sensitively align PacBilo or Oxford Nanopore to (large) reference genomes. It was designed to quickly and correctly align the reads, including those spanning (complex) structural variations. Ngmlr uses an SV aware k-mer search to find approximate mapping locations for a read and then a banded Smith- Waterman alignment algorithm to compute the final alignment. Ngmlr uses a convex gap cost model that penalizes gap extensions for longer gaps less than for shorter ones to compute precise alignments.
ngmlr ile İlgili Diğer Paketler
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
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- dep: libgcc-s1 (>= 3.3.1) [armhf değil]
- GCC support library
- dep: libgcc-s1 (>= 3.5) [armhf]
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- dep: libssw0 (>= 1.1)
- fast SIMD parallelized implementation of the Smith-Waterman algorithm
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- dep: libstdc++6 (>= 11)
- GNU Standard C++ Library v3
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- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
ngmlr indir
| Mimari | Paket Boyutu | Kurulu Boyut | Dosyalar |
|---|---|---|---|
| amd64 | 692,7 kB | 1164 kB | [dosya listesi] |
| arm64 | 683,9 kB | 1128 kB | [dosya listesi] |
| armhf | 665,9 kB | 1007 kB | [dosya listesi] |
| ppc64el | 701,7 kB | 1236 kB | [dosya listesi] |