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[ 源代码: circlator  ]

circlator 的相关链接

Trisquel 的资源:

• Install using apturl
• Entry at directory.fsf.org
• 报告问题
• Changelog
• 版权文件

下载源码包 circlator:

• [circlator_1.5.5-1.dsc]
• [circlator_1.5.5.orig.tar.gz]
• [circlator_1.5.5-1.debian.tar.xz]

维护者:

• Debian Med Packaging Team (Mail Archive)

Original Maintainers:

• Debian Med Packaging Team (Mail Archive)
• Afif Elghraoui

外部的资源:

• 主页 [sanger-pathogens.github.io]

相似软件包:

• unicycler
• plasmidseeker
• unicycler-data
• busco
• metaphlan2
• plasmidid
• metaphlan2-data
• soapdenovo2
• parsnp
• soapdenovo
• shasta

其他与 circlator 有关的软件包

依赖

推荐

建议

• dep: bwa (>= 0.7.12)

  Burrows-Wheeler Aligner

• dep: fastaq (>= 3.12.1)

  FASTA and FASTQ file manipulation tools

• dep: mummer

  Efficient sequence alignment of full genomes

• dep: prodigal

  Microbial (bacterial and archaeal) gene finding program

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-openpyxl

  Python 3 module to read/write OpenXML xlsx/xlsm files

• dep: python3-pymummer (>= 0.9.0)

  Python 3 interface to MUMmer

• dep: python3-pysam (>= 0.8.1)

  interface for the SAM/BAM sequence alignment and mapping format (Python 3)

• dep: samtools

  processing sequence alignments in SAM and BAM formats

• dep: spades

  genome assembler for single-cell and isolates data sets

• sug: canu

  single molecule sequence assembler for genomes

下载 circlator

下载可用于所有硬件架构的

硬件架构	软件包大小	安装后大小	文件
all	4,225.1 kB	10301 kB	[文件列表]