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[ 源代码: stacks  ]

软件包: stacks (2.41+dfsg-1build3)

stacks 的相关链接

stacks

Trisquel 的资源:

下载源码包 stacks:

维护者:

Original Maintainers:

  • Debian Med Packaging Team (Mail Archive)
  • Tim Booth
  • Andreas Tille

外部的资源:

  • 主页 [creskolab.uoregon.edu]

相似软件包:

pipeline for building loci from short-read DNA sequences

Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography.

Note that this package installs Stacks such that all commands must be run as: $ stacks <cmdname> <args>

其他与 stacks 有关的软件包

  • 依赖
  • 推荐
  • 建议
  • dep: libc6 (>= 2.29)
    GNU C Library: Shared libraries
    同时作为一个虚包由这些包填实: libc6-udeb
  • dep: libdbi-perl
    Perl Database Interface (DBI)
  • dep: libgcc-s1 (>= 3.0) [amd64]
    GCC support library
    dep: libgcc-s1 (>= 3.5) [armhf]
  • dep: libgomp1 (>= 6)
    GCC OpenMP (GOMP) support library
  • dep: libhts3 (>= 1.10)
    C library for high-throughput sequencing data formats
  • dep: libstdc++6 (>= 9)
    GNU Standard C++ Library v3
  • dep: samtools
    processing sequence alignments in SAM, BAM and CRAM formats
  • dep: zlib1g (>= 1:1.2.6)
    compression library - runtime

下载 stacks

下载可用于所有硬件架构的
硬件架构 软件包大小 安装后大小 文件
amd64 987.7 kB5385 kB [文件列表]
armhf 833.8 kB3144 kB [文件列表]