Пакет: pscan-tfbs (1.2.2-4build1)
Ссылки для pscan-tfbs
Ресурсы Trisquel:
Исходный код pscan-tfbs:
- [pscan-tfbs_1.2.2-4build1.dsc]
- [pscan-tfbs_1.2.2.orig.tar.gz]
- [pscan-tfbs_1.2.2-4build1.debian.tar.xz]
Сопровождающий:
Original Maintainers:
- Debian Med Packaging Team (Почтовый архив)
- Steffen Moeller
Внешние ресурсы:
- Сайт [www.beaconlab.it]
Подобные пакеты:
search for transcription factor binding sites
Pscan finds Over-represented Transcription Factor Binding Site Motifs in Sequences from Co-Regulated or Co-Expressed Genes.
Pscan is a software tool that scans a set of sequences (e.g. promoters) from co-regulated or co-expressed genes with motifs describing the binding specificity of known transcription factors and assesses which motifs are significantly over- or under-represented, providing thus hints on which transcription factors could be common regulators of the genes studied, together with the location of their candidate binding sites in the sequences. Pscan does not resort to comparisons with orthologous sequences and experimental results show that it compares favorably to other tools for the same task in terms of false positive predictions and computation time. The website is free and open to all users and there is no login requirement.
Другие пакеты, относящиеся к pscan-tfbs
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-
- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
также виртуальный пакет, предоставляемый libc6-udeb
-
- dep: libgcc-s1 (>= 3.3.1) [не armhf]
- GCC support library
- dep: libgcc-s1 (>= 3.5) [armhf]
-
- dep: libgsl27 (>= 2.7.1)
- GNU Scientific Library (GSL) -- library package
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- dep: libstdc++6 (>= 11)
- GNU Standard C++ Library v3
Загрузка pscan-tfbs
| Архитектура | Размер пакета | В установленном виде | Файлы |
|---|---|---|---|
| amd64 | 75,0 Кб | 196 Кб | [список файлов] |
| arm64 | 70,7 Кб | 164 Кб | [список файлов] |
| armhf | 64,9 Кб | 123 Кб | [список файлов] |
| ppc64el | 90,3 Кб | 228 Кб | [список файлов] |