[ nabia ]
[ aramo ]
[ Bron: samblaster ]
Pakket: samblaster (0.1.24-2build1)
Verwijzigingen voor samblaster
Trisquel bronnen:
Het bronpakket samblaster downloaden:
- [samblaster_0.1.24-2build1.dsc]
- [samblaster_0.1.24.orig.tar.gz]
- [samblaster_0.1.24-2build1.debian.tar.xz]
Beheerder:
Original Maintainers:
- Debian Med Packaging Team (Mailarchief)
- Steffen Moeller
Externe bronnen:
- Homepage [github.com]
Vergelijkbare pakketten:
marks duplicates, extracts discordant/split reads
Current "next-generation" sequencing technologies cannot tell what exact sequence they will be reading. They take what is available. And if some sequences are read very often, then this needs some extra biomedical thinking. The genome could for instance be duplicated.
samblaster is a fast and flexible program for marking duplicates in read-id grouped paired-end SAM files. It can also optionally output discordant read pairs and/or split read mappings to separate SAM files, and/or unmapped/clipped reads to a separate FASTQ file. When marking duplicates, samblaster will require approximately 20MB of memory per 1M read pairs.
Andere aan samblaster gerelateerde pakketten
|
|
|
-
- dep: libc6 (>= 2.14) [amd64]
- GNU C Library: Shared libraries
Ook een virtueel pakket geboden door: libc6-udeb
- dep: libc6 (>= 2.8) [armhf]
-
- dep: libgcc-s1 (>= 3.5) [armhf]
- GCC support library
-
- dep: libstdc++6 (>= 5)
- GNU Standard C++ Library v3