[ aramo ]
[ ソース: bio-vcf ]
パッケージ: bio-vcf (0.9.5-3)
bio-vcf に関するリンク
Trisquel の資源:
bio-vcf ソースパッケージをダウンロード:
メンテナ:
Original Maintainers:
- Debian Med Packaging Team (メールアーカイブ)
- Andreas Tille
- Nilesh Patra
外部の資源:
- ホームページ [github.com]
類似のパッケージ:
domain specific language (DSL) for processing the VCF format
Bio-vcf provides a domain specific language (DSL) for processing the VCF format. Record named fields can be queried with regular expressions, e.g.
sample.dp>20 and rec.filter !~ /LowQD/ and rec.tumor.bcount[rec.alt]>4
Bio-vcf is a new generation VCF parser, filter and converter. Bio-vcf is not only very fast for genome-wide (WGS) data, it also comes with a really nice filtering, evaluation and rewrite language and it can output any type of textual data, including VCF header and contents in RDF and JSON.
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