[ aramo ]
[ Source: bio-vcf ]
Paketti: bio-vcf (0.9.5-3)
Links for bio-vcf
Trisquel-palvelut:
Imuroi lähdekoodipaketti bio-vcf:
Ylläpitäjä:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Andreas Tille
- Nilesh Patra
External Resources:
- Kotisivu [github.com]
Samankaltaisia paketteja:
domain specific language (DSL) for processing the VCF format
Bio-vcf provides a domain specific language (DSL) for processing the VCF format. Record named fields can be queried with regular expressions, e.g.
sample.dp>20 and rec.filter !~ /LowQD/ and rec.tumor.bcount[rec.alt]>4
Bio-vcf is a new generation VCF parser, filter and converter. Bio-vcf is not only very fast for genome-wide (WGS) data, it also comes with a really nice filtering, evaluation and rewrite language and it can output any type of textual data, including VCF header and contents in RDF and JSON.
Muut pakettiin bio-vcf liittyvät paketit
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- dep: ruby
- Interpreter of object-oriented scripting language Ruby (default version)
Imuroi bio-vcf
| Arkkitehtuuri | Paketin koko | Koko asennettuna | Tiedostot |
|---|---|---|---|
| all | 29.2 kt | 141 kt | [tiedostoluettelo] |