Skip to content
Sections
>> Trisquel >> Paketit >> aramo >> science >> fml-asm
etiona  ] [  nabia  ] [  aramo  ]
[ Source: fermi-lite  ]

Paketti: fml-asm (0.1+git20190320.b499514-1)

tool for assembling Illumina short reads in small regions

Fml-asm is a command-line tool for assembling Illumina short reads in regions from 100bp to 10 million bp in size, based on the fermi-lite library. It is largely a light-weight in-memory version of fermikit without generating any intermediate files. It inherits the performance, the relatively small memory footprint and the features of fermikit. In particular, fermi-lite is able to retain heterozygous events and thus can be used to assemble diploid regions for the purpose of variant calling.

Muut pakettiin fml-asm liittyvät paketit

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    myös näennäispaketti, jonka toteuttaa libc6-udeb
    dep: libc6 (>= 2.17) [arm64, ppc64el]
    dep: libc6 (>= 2.7) [armhf]
  • dep: zlib1g (>= 1:1.1.4)
    compression library - runtime

Imuroi fml-asm

Imurointi kaikille saataville arkkitehtuureille
Arkkitehtuuri Paketin koko Koko asennettuna Tiedostot
amd64 66.8 kt159 kt [tiedostoluettelo]
arm64 61.1 kt143 kt [tiedostoluettelo]
armhf 66.1 kt118 kt [tiedostoluettelo]
ppc64el 75.8 kt211 kt [tiedostoluettelo]