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[ Източник: circlator  ]

Пакет: circlator (1.5.6-1)

Връзки за circlator

circlator

Ресурси за Trisquel:

Изтегляне на пакет-източник circlator.

Отговорник:

Original Maintainers:

Външни препратки:

Подобни пакети:

circularize genome assemblies

Circlator is a tool to automate assembly circularization for bacterial and small eukaryotic genomes and produce accurate linear representations of circular sequences.

Други пакети, свързани с circlator

  • зависимости
  • препоръчани
  • предложени
  • dep: bwa (>= 0.7.12)
    Burrows-Wheeler Aligner
  • dep: fastaq (>= 3.12.1)
    FASTA and FASTQ file manipulation tools
  • dep: mummer
    Efficient sequence alignment of full genomes
  • dep: prodigal
    Microbial (bacterial and archaeal) gene finding program
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
  • dep: python3-openpyxl
    Python 3 module to read/write OpenXML xlsx/xlsm files
  • dep: python3-pymummer
    Python 3 interface to MUMmer
  • dep: python3-pysam
    interface for the SAM/BAM sequence alignment and mapping format (Python 3)
  • dep: samtools
    processing sequence alignments in SAM, BAM and CRAM formats
  • dep: spades
    genome assembler for single-cell and isolates data sets
  • sug: canu
    single molecule sequence assembler for genomes

Изтегляне на circlator

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