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Package: dascrubber (1.1-4)

alignment-based scrubbing pipeline for DNA sequencing reads

The Dazzler Scrubbing Suite produces a set of edited reads that are guaranteed to 

 * be continuous stretches of the underlying genome (i.e. no unremoved
   adapters and not chimers)
 * have no very low quality stretches (i.e. the error rate never exceeds some
   reasonable maximum, 20% or so in the case of Pacbio data).
Its secondary goal is to do so with the minimum removal of data and splitting of reads.

Other Packages Related to dascrubber

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • sug: daligner
    local alignment discovery between long nucleotide sequencing reads
  • sug: dazzdb
    manage nucleotide sequencing read data

Download dascrubber

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 109.7 kB385 kB [list of files]
arm64 109.8 kB345 kB [list of files]
armhf 158.5 kB799 kB [list of files]
ppc64el 123.1 kB765 kB [list of files]