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原始碼套件: cnvkit (0.9.6-3)

cnvkit 的相關超連結

Trisquel 的資源:

維護者:

Original Maintainers:

  • Debian Med Packaging Team (郵件存檔)
  • Michael R. Crusoe
  • Steffen Moeller
  • Olivier Sallou

外部的資源:

  • 主頁 [cnvkit.readthedocs.org]
本原始碼套件構建了以下這些二進制套件:
cnvkit
Copy number variant detection from targeted DNA sequencing

其他與 cnvkit 有關的套件

  • 完整構建時刻依賴
  • 單獨構建時刻依賴
  • adep: debhelper-compat (= 12)
    套件暫時不可用
  • adep: dh-python
    Debian helper tools for packaging Python libraries and applications
  • adep: python3-all
    package depending on all supported Python 3 runtime versions
  • adep: python3-setuptools
    Python3 Distutils Enhancements
  • adep: python3-pyfaidx
    efficient random access to fasta subsequences for Python 3
  • adep: help2man
    Automatic manpage generator
  • adep: python3-biopython
    Python3 library for bioinformatics
  • adep: python3-pandas
    data structures for "relational" or "labeled" data
  • adep: python3-numpy
    Fast array facility to the Python 3 language
  • adep: python3-pysam
    interface for the SAM/BAM sequence alignment and mapping format (Python 3)
  • adep: python3-scipy
    scientific tools for Python 3
  • adep: python3-matplotlib
    Python based plotting system in a style similar to Matlab (Python 3)
  • adep: python3-pyvcf
    本虛擬套件由這些套件提供: python3-vcf
  • adep: python3-future
    Clean single-source support for Python 3 and 2 - Python 3.x
  • adep: python3-pomegranate (>= 0.9.0)
    Fast, flexible and easy to use probabilistic modelling
  • adep: r-bioc-dnacopy
    R package: DNA copy number data analysis
  • adep: poppler-utils
    PDF utilities (based on Poppler)

Download cnvkit

文件大小(單位: kB)MD5 檢查碼
cnvkit_0.9.6-3.dsc 2.3 kB 704eed95e9f61d8693e9b80a88732448
cnvkit_0.9.6.orig.tar.gz 23,103.4 kB 58ad4fe3444c022e72f26481c0b160e7
cnvkit_0.9.6-3.debian.tar.xz 5.7 kB a5b1ddf57d90ddf098ff6185e0c68ac4
Debian 套件原始碼倉庫(VCS: Git)
https://salsa.debian.org/med-team/cnvkit.git
Debian 套件原始碼倉庫(可在線瀏覽)
https://salsa.debian.org/med-team/cnvkit