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[ 原始碼： openms ]
套件： topp (2.4.0-real-1ubuntu4)
topp 的相關超連結
Trisquel 的資源：
下載原始碼套件 openms：
- [openms_2.4.0-real-1ubuntu4.dsc]
- [openms_2.4.0-real.orig.tar.gz]
- [openms_2.4.0-real-1ubuntu4.debian.tar.xz]
維護者：
Original Maintainers:
- The Debichem Group (郵件存檔)
- Filippo Rusconi
外部的資源：
- 主頁 [www.openms.de]
相似套件：
set of programs implementing The OpenMS Proteomic Pipeline
TOPP (the OpenMS proteomic pipeline) is a pipeline for the analysis of HPLC/MS data. It consists of a set of numerous small applications that can be chained together to create analysis pipelines tailored for a specific problem. The applications make use of the libopenms library. Some examples of these applications are :
- TOPPView: A viewer for mass spectrometry data.
- TOPPAS: An assistant for GUI-driven TOPP workflow design.
- DTAExtractor: Extracts spectra of an MS run file to several
files in DTA format.
- FileConverter: Converts between different MS file formats.
- FileFilter: Extracts or manipulates portions of data from peak,
feature or consensus feature files.
- SpectraMerger: Merges spectra from an LC/MS map, either by
precursor or by RT blocks.
- BaselineFilter: Removes the baseline from profile spectra using a
top-hat filter.
- InternalCalibration: Applies an internal calibration.
- PTModel: Trains a model for the prediction of proteotypic
peptides from a training set.
- RTPredict: Predicts retention times for peptides using a model
trained by RTModel.
- ExecutePipeline: Executes workflows created by TOPPAS.
其他與 topp 有關的套件
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- dep: libboost-regex1.71.0-icu66
- 本虛擬套件由這些套件提供： libboost-regex1.71.0
-
- dep: libc6 (>= 2.29)
- GNU C Library: Shared libraries
同時作為一個虛擬套件由這些套件提供： libc6-udeb
-
- dep: libgcc-s1 (>= 3.0)
- GCC support library
-
- dep: libgomp1 (>= 6)
- GCC OpenMP (GOMP) support library
-
- dep: libopenms2.4.0 (= 2.4.0-real-1ubuntu4)
- library for LC/MS data management and analysis - runtime
-
- dep: libqt5core5a (>= 5.12.2)
- Qt 5 core module
-
- dep: libqt5gui5 (>= 5.8.0)
- Qt 5 GUI module
- 或者 libqt5gui5-gles (>= 5.8.0)
- Qt 5 GUI module — OpenGL ES variant
-
- dep: libqt5widgets5 (>= 5.7.0)
- Qt 5 widgets module
-
- dep: libstdc++6 (>= 9)
- GNU Standard C++ Library v3
-
- dep: libxerces-c3.2
- validating XML parser library for C++
-
- dep: openms-common (= 2.4.0-real-1ubuntu4)
- package for LC/MS data management and analysis - shared data
-
- sug: openms-doc
- package for LC/MS data management and analysis - documentation