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[ 原始碼: python-pyspoa  ]

套件: python3-pyspoa (0.0.8-2build1)

Python bindings to spoa

Spoa (SIMD POA) is a c++ implementation of the partial order alignment (POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which is used to generate consensus sequences (as described in 10.1093/bioinformatics/btg109). It supports three alignment modes: local (Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment (overlap).

This package presents Python bindings for the spoa library

其他與 python3-pyspoa 有關的套件

  • 依賴
  • 推薦
  • 建議
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    同時作為一個虛擬套件由這些套件提供: libc6-udeb
    dep: libc6 (>= 2.17) [arm64, ppc64el]
    dep: libc6 (>= 2.4) [armhf]
  • dep: libgcc-s1 (>= 3.3.1) [除 armhf]
    GCC support library
    dep: libgcc-s1 (>= 3.5) [armhf]
  • dep: libspoa7.0.0 (>= 4.0.5+ds) [amd64]
    SIMD partial order alignment library
    dep: libspoa7.0.0 (>= 4.0.7+ds) [除 amd64]
  • dep: libstdc++6 (>= 11)
    GNU Standard C++ Library v3
  • dep: python3 (<< 3.11)
    interactive high-level object-oriented language (default python3 version)
    dep: python3 (>= 3.10~)
  • dep: python3-pybind11
    pybind11 helper module for Python 3

下載 python3-pyspoa

下載可用於所有硬體架構的
硬體架構 套件大小 安裝後大小 檔案
amd64 48.6 kB134 kB [文件列表]
arm64 45.6 kB114 kB [文件列表]
armhf 44.8 kB93 kB [文件列表]
ppc64el 53.3 kB150 kB [文件列表]