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[ 源代码: sambamba  ]

软件包: sambamba (0.6.7-2)

tools for working with SAM/BAM data

Sambamba positions itself as a performant alternative to samtools and provides tools for 

 * Powerful filtering with sambamba view --filter
 * Picard-like SAM header merging in the merge tool
 * Optional for operations on whole BAMs
 * Fast copying of a region to a new file with the slice tool
 * Duplicate marking/removal, using the Picard criteria

其他与 sambamba 有关的软件包

  • 依赖
  • 推荐
  • 建议
  • dep: libbiod0
    bioinformatics library in D
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    同时作为一个虚包由这些包填实: libc6-udeb
    dep: libc6 (>= 2.3.6-6~) [i386]
  • dep: libhts2 (>= 1.4.1)
    C library for high-throughput sequencing data formats
  • dep: liblz4-1 (>= 0.0~r127)
    Fast LZ compression algorithm library - runtime
  • dep: libphobos2-ldc-shared78
    LLVM D Compiler - Phobos2 Standard library, shared objects
  • dep: libundead0
    Obsolete Phobos modules upgraded to work with the latest D

下载 sambamba

下载可用于所有硬件架构的
硬件架构 软件包大小 安装后大小 文件
amd64 501.6 kB2362 kB [文件列表]
i386 521.9 kB2492 kB [文件列表]