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[ 源代码: probalign  ]

软件包: probalign (1.4-7)

multiple sequence alignment using partition function posterior probabilities

Probalign uses partition function posterior probability estimates to compute maximum expected accuracy multiple sequence alignments. It performs statistically significantly better than the leading alignment programs Probcons v1.1, MAFFT v5.851, and MUSCLE v3.6 on BAliBASE 3.0, HOMSTRAD, and OXBENCH benchmarks. Probalign improvements are largest on datasets containing N/C terminal extensions and on datasets with long and heterogeneous length sequences. On heteregeneous length datasets containing repeats Probalign alignment accuracy is 10% and 15% higher than the other three methods when standard deviation of length is at least 300 and 400.

其他与 probalign 有关的软件包

  • 依赖
  • 推荐
  • 建议
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    同时作为一个虚包由这些包填实: libc6-udeb
    dep: libc6 (>= 2.4) [i386]
  • dep: libgcc1 (>= 1:3.0)
    GCC support library
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3

下载 probalign

下载可用于所有硬件架构的
硬件架构 软件包大小 安装后大小 文件
amd64 63.4 kB163 kB [文件列表]
i386 61.1 kB154 kB [文件列表]