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[ Kaynak: spades  ]

Paket: spades (3.13.1+dfsg-2ubuntu1)

spades için bağlantılar

spades

Trisquel Kaynakları:

spades Kaynak Paketini İndir:

Geliştirici:

Original Maintainers:

  • Debian Med Packaging Team (Posta Arşivi)
  • Andreas Tille
  • Sascha Steinbiss
  • Michael R. Crusoe
  • Alexandre Mestiashvili

Dış Kaynaklar:

Benzer paketler:

genome assembler for single-cell and isolates data sets

The SPAdes – St. Petersburg genome assembler is intended for both standard isolates and single-cell MDA bacteria assemblies. It works with Illumina or IonTorrent reads and is capable of providing hybrid assemblies using PacBio and Sanger reads. You can also provide additional contigs that will be used as long reads.

spades ile İlgili Diğer Paketler

  • bağımlılıklar
  • tavsiye edilen
  • önerilen
  • dep: bamtools
    toolkit for manipulating BAM (genome alignment) files
  • dep: bwa
    Burrows-Wheeler Aligner
  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
  • dep: libgcc-s1 (>= 4.0)
    GCC support library
  • dep: libgomp1 (>= 6)
    GCC OpenMP (GOMP) support library
  • dep: libhat-trie0
    HAT-trie, an extremely efficient (space and time) modern variant of tries
  • dep: libnlopt0 (>= 2.6.1)
    nonlinear optimization library
  • dep: libssw0 (>= 1.1)
    fast SIMD parallelized implementation of the Smith-Waterman algorithm
  • dep: libstdc++6 (>= 11)
    GNU Standard C++ Library v3
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
  • dep: python3-distutils
    distutils package for Python 3.x
  • dep: python3-joblib
    tools to provide lightweight pipelining in Python
  • dep: python3-yaml
    YAML parser and emitter for Python3
  • dep: samtools
    processing sequence alignments in SAM, BAM and CRAM formats
  • dep: zlib1g (>= 1:1.2.3.3)
    compression library - runtime

spades indir

Tüm mevcut mimariler için indir
Mimari Paket Boyutu Kurulu Boyut Dosyalar
amd64 4.967,9 kB22271 kB [dosya listesi]