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Paket: libmems1 (1.6.0+4725-9build1)

library to support DNA string matching and comparative genomics

libMems is a freely available software development library to support DNA string matching and comparative genomics. Among other things, libMems implements an algorithm to perform approximate multi-MUM and multi-MEM identification. The algorithm uses spaced seed patterns in conjunction with a seed-and-extend style hashing method to identify matches. The method is efficient, requiring a maximum of only 16 bytes per base of the largest input sequence, and this data can be stored externally (i.e. on disk) to further reduce memory requirements.

This package contains the dynamic library.

Andra paket besläktade med libmems1

  • beror
  • rekommenderar
  • föreslår
  • dep: libboost-filesystem1.74.0 (>= 1.74.0)
    filesystem operations (portable paths, iteration over directories, etc) in C++
  • dep: libboost-iostreams1.74.0 (>= 1.74.0)
    Boost.Iostreams Library
  • dep: libc6 (>= 2.29)
    GNU C Library: Shared libraries
    också ett virtuellt paket som tillhandahålls av libc6-udeb
  • dep: libgcc-s1 (>= 3.0) [arm64, ppc64el]
    GCC support library
    dep: libgcc-s1 (>= 3.4) [amd64]
    dep: libgcc-s1 (>= 3.5) [armhf]
  • dep: libgenome0 (>= 1.3.11+svn20110227.4616)
    toolkit for developing bioinformatic related software
  • dep: libmuscle1 (>= 3.7+4565)
    multiple alignment library for protein sequences
  • dep: libstdc++6 (>= 5.2) [armhf]
    GNU Standard C++ Library v3
    dep: libstdc++6 (>= 9) [ej armhf]

Hämta libmems1

Hämtningar för alla tillgängliga arkitekturer
Arkitektur Paketstorlek Installerad storlek Filer
amd64 655,0 kbyte2021 kbyte [filförteckning]
arm64 611,0 kbyte1787 kbyte [filförteckning]
armhf 545,2 kbyte1246 kbyte [filförteckning]
ppc64el 788,9 kbyte2328 kbyte [filförteckning]