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[ 原始碼: libmems  ]

套件: libmems1 (1.6.0+4725-9build1)

library to support DNA string matching and comparative genomics

libMems is a freely available software development library to support DNA string matching and comparative genomics. Among other things, libMems implements an algorithm to perform approximate multi-MUM and multi-MEM identification. The algorithm uses spaced seed patterns in conjunction with a seed-and-extend style hashing method to identify matches. The method is efficient, requiring a maximum of only 16 bytes per base of the largest input sequence, and this data can be stored externally (i.e. on disk) to further reduce memory requirements.

This package contains the dynamic library.

其他與 libmems1 有關的套件

  • 依賴
  • 推薦
  • 建議
  • dep: libboost-filesystem1.74.0 (>= 1.74.0)
    filesystem operations (portable paths, iteration over directories, etc) in C++
  • dep: libboost-iostreams1.74.0 (>= 1.74.0)
    Boost.Iostreams Library
  • dep: libc6 (>= 2.29)
    GNU C Library: Shared libraries
    同時作為一個虛擬套件由這些套件提供: libc6-udeb
  • dep: libgcc-s1 (>= 3.0) [arm64, ppc64el]
    GCC support library
    dep: libgcc-s1 (>= 3.4) [amd64]
    dep: libgcc-s1 (>= 3.5) [armhf]
  • dep: libgenome0 (>= 1.3.11+svn20110227.4616)
    toolkit for developing bioinformatic related software
  • dep: libmuscle1 (>= 3.7+4565)
    multiple alignment library for protein sequences
  • dep: libstdc++6 (>= 5.2) [armhf]
    GNU Standard C++ Library v3
    dep: libstdc++6 (>= 9) [除 armhf]

下載 libmems1

下載可用於所有硬體架構的
硬體架構 套件大小 安裝後大小 檔案
amd64 655.0 kB2021 kB [文件列表]
arm64 611.0 kB1787 kB [文件列表]
armhf 545.2 kB1246 kB [文件列表]
ppc64el 788.9 kB2328 kB [文件列表]