[ Källkod: bowtie ]
Paket: bowtie (1.3.1-1)
Länkar för bowtie
Trisquelresurser:
Hämta källkodspaketet bowtie:
Ansvarig:
Original Maintainers:
- Debian Med Packaging Team (E-postarkiv)
- Steffen Moeller
- Andreas Tille
- Ognyan Kulev
- Stephan Struckmann
- Alexandre Mestiashvili
Externa resurser:
- Hemsida [bowtie-bio.sourceforge.net]
Liknande paket:
Ultrafast memory-efficient short read aligner
This package addresses the problem to interpret the results from the latest (2010) DNA sequencing technologies. Those will yield fairly short stretches and those cannot be interpreted directly. It is the challenge for tools like Bowtie to give a chromosomal location to the short stretches of DNA sequenced per run.
Bowtie aligns short DNA sequences (reads) to the human genome at a rate of over 25 million 35-bp reads per hour. Bowtie indexes the genome with a Burrows-Wheeler index to keep its memory footprint small: typically about 2.2 GB for the human genome (2.9 GB for paired-end).
Andra paket besläktade med bowtie
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
också ett virtuellt paket som tillhandahålls av libc6-udeb
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- dep: libgcc-s1 (>= 3.3.1)
- GCC support library
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- dep: libstdc++6 (>= 11) [ej ppc64el]
- GNU Standard C++ Library v3
- dep: libstdc++6 (>= 9) [ppc64el]
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: zlib1g (>= 1:1.2.6)
- compression library - runtime
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- sug: bowtie-examples
- Examples for bowtie, the ultrafast memory-efficient short read aligner
Hämta bowtie
| Arkitektur | Paketstorlek | Installerad storlek | Filer |
|---|---|---|---|
| amd64 | 1.559,7 kbyte | 5827 kbyte | [filförteckning] |
| arm64 | 1.316,2 kbyte | 4980 kbyte | [filförteckning] |
| ppc64el | 1.577,3 kbyte | 7424 kbyte | [filförteckning] |