Paket: tophat-recondition (1.4-3)

Länkar för tophat-recondition

Trisquelresurser:

Hämta källkodspaketet tophat-recondition:

Ansvarig:

Debian Med Packaging Team (E-postarkiv)

Original Maintainers:

Debian Med Packaging Team (E-postarkiv)
Steffen Moeller
Michael R. Crusoe

Externa resurser:

Hemsida [github.com]

Liknande paket:

post-processor for TopHat unmapped reads

tophat-recondition is a post-processor for TopHat unmapped reads (contained in unmapped.bam), making them compatible with downstream tools (e.g., the Picard suite, samtools, GATK) (TopHat issue #17). It also works around bugs in TopHat:

 * the "mate is unmapped" SAM flag is not set on any reads in the
   unmapped.bam file (TopHat issue #3)
 * the mapped mate of an unmapped read can be absent from
   accepted_hits.bam, creating a mismatch between the file and the unmapped
   read's flags (TopHat issue #16)

Andra paket besläktade med tophat-recondition

beror

rekommenderar

föreslår

dep: python3

interactive high-level object-oriented language (default python3 version)

sug: tophat2

Paketet inte tillgängligt

Hämta tophat-recondition

Hämtningar för alla tillgängliga arkitekturer
Arkitektur	Paketstorlek	Installerad storlek	Filer
all	9,4 kbyte	34 kbyte	[filförteckning]

Sections