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[ Источник: ragout ]
Пакет: ragout (2.2+ds-1build2)
Ссылки для ragout
Ресурсы Trisquel:
Исходный код ragout:
Сопровождающий:
Original Maintainers:
- Debian Med Packaging Team (Почтовый архив)
- Andreas Tille
Внешние ресурсы:
- Сайт [github.com]
Подобные пакеты:
Reference-Assisted Genome Ordering UTility
Ragout (Reference-Assisted Genome Ordering UTility) is a tool for chromosome-level scaffolding using multiple references. Given initial assembly fragments (contigs/scaffolds) and one or multiple related references (complete or draft), it produces a chromosome-scale assembly (as a set of scaffolds).
The approach is based on the analysis of genome rearrangements (like inversions or chromosomal translocations) between the input genomes and reconstructing the most parsimonious structure of the target genome.
Ragout now supports both small and large genomes (of mammalian scale and complexity). The assembly of highly polymorphic genomes is currently limited.
Другие пакеты, относящиеся к ragout
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- dep: libc6 (>= 2.14) [amd64]
- GNU C Library: Shared libraries
также виртуальный пакет, предоставляемый libc6-udeb
- dep: libc6 (>= 2.4) [armhf]
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- dep: libgcc-s1 (>= 3.0) [amd64]
- GCC support library
- dep: libgcc-s1 (>= 3.5) [armhf]
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- dep: libstdc++6 (>= 9)
- GNU Standard C++ Library v3
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- dep: python3
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- dep: python3-networkx (>= 2.2)
- tool to create, manipulate and study complex networks (Python3)
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- rec: sibelia
- Пакет недоступен
Загрузка ragout
| Архитектура | Размер пакета | В установленном виде | Файлы |
|---|---|---|---|
| amd64 | 105,7 Кб | 428 Кб | [список файлов] |
| armhf | 97,6 Кб | 346 Кб | [список файлов] |