[ nabia ]
[ aramo ]
[ Zdroj: ragout ]
Balík: ragout (2.2+ds-1build2)
Odkazy pre ragout
Zdroje Trisquel:
Stiahnuť zdrojový balík ragout:
Správca:
Original Maintainers:
- Debian Med Packaging Team (Konferencia)
- Andreas Tille
Externé zdroje:
- Domovská stránka [github.com]
Podobné balíky:
Reference-Assisted Genome Ordering UTility
Ragout (Reference-Assisted Genome Ordering UTility) is a tool for chromosome-level scaffolding using multiple references. Given initial assembly fragments (contigs/scaffolds) and one or multiple related references (complete or draft), it produces a chromosome-scale assembly (as a set of scaffolds).
The approach is based on the analysis of genome rearrangements (like inversions or chromosomal translocations) between the input genomes and reconstructing the most parsimonious structure of the target genome.
Ragout now supports both small and large genomes (of mammalian scale and complexity). The assembly of highly polymorphic genomes is currently limited.
Ostatné balíky súvisiace s balíkom ragout
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- dep: libc6 (>= 2.14) [amd64]
- GNU C Library: Shared libraries
tiež virtuálny balík poskytovaný balíkom libc6-udeb
- dep: libc6 (>= 2.4) [armhf]
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- dep: libgcc-s1 (>= 3.0) [amd64]
- GCC support library
- dep: libgcc-s1 (>= 3.5) [armhf]
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- dep: libstdc++6 (>= 9)
- GNU Standard C++ Library v3
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-networkx (>= 2.2)
- tool to create, manipulate and study complex networks (Python3)
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- rec: sibelia
- Balík nie je dostupný
Stiahnuť ragout
| Architektúra | Veľkosť balíka | Nainštalovaná veľkosť | Súbory |
|---|---|---|---|
| amd64 | 105.7 kB | 428 kB | [zoznam súborov] |
| armhf | 97.6 kB | 346 kB | [zoznam súborov] |