Пакет: r-cran-seurat (3.1.3-1)

Ссылки для r-cran-seurat

Ресурсы Trisquel:

• Install using apturl
• Entry at directory.fsf.org
• Сообщения об ошибках
• Changelog
• Файл авторских прав

Исходный код r-cran-seurat:

• [r-cran-seurat_3.1.3-1.dsc]
• [r-cran-seurat_3.1.3.orig.tar.gz]
• [r-cran-seurat_3.1.3-1.debian.tar.xz]

Сопровождающий:

• Debian R Packages Maintainers

Original Maintainers:

• Debian R Packages Maintainers
• Steffen Moeller

Внешние ресурсы:

• Сайт [cran.r-project.org]

Подобные пакеты:

• r-bioc-scater
• r-cran-sctransform
• r-bioc-singler
• r-cran-genie
• pizzly
• crac
• r-bioc-edaseq
• r-bioc-shortread
• r-bioc-edger
• r-cran-bios2cor
• r-cran-coarsedatatools

Другие пакеты, относящиеся к r-cran-seurat

• dep: libc6 (>= 2.29)

  GNU C Library: Shared libraries
  также виртуальный пакет, предоставляемый libc6-udeb

• dep: libgcc-s1 (>= 3.5)

  GCC support library

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: r-api-3.5

  виртуальный пакет, предоставляемый r-base-core

• dep: r-base-core (>= 3.6.2-2build1)

  GNU R core of statistical computation and graphics system

• dep: r-cran-ape

  GNU R package for Analyses of Phylogenetics and Evolution

• dep: r-cran-cluster

  GNU R package for cluster analysis by Rousseeuw et al

• dep: r-cran-cowplot

  GNU R streamlined plot theme and plot annotations for 'ggplot2'

• dep: r-cran-fitdistrplus

  support fit of parametric distribution

• dep: r-cran-future

  R package: A Future API for R

• dep: r-cran-future.apply

  apply function to elements in parallel using futures

• dep: r-cran-ggplot2 (>= 3.0.0)

  implementation of the Grammar of Graphics

• dep: r-cran-ggrepel

  auto-position non-overlapping text labels in plots

• dep: r-cran-ggridges

  Ridgeline Plots in 'ggplot2'

• dep: r-cran-httr

  GNU R tools for working with URLs and HTTP

• dep: r-cran-ica

  Independent Component Analysis

• dep: r-cran-igraph

  GNU R network analysis and visualization

• dep: r-cran-irlba

  GNU R fast truncated SVD, PCA and symmetric eigendecomposition

• dep: r-cran-kernsmooth

  GNU R package for kernel smoothing and density estimation

• dep: r-cran-leiden (>= 0.3.1)

  GNU R implementation of Leiden clustering algorithm

• dep: r-cran-lmtest

  GNU R package for diagnostic checking in linear models

• dep: r-cran-mass

  GNU R package of Venables and Ripley's MASS

• dep: r-cran-matrix (>= 1.2-14)

  GNU R package of classes for dense and sparse matrices

• dep: r-cran-metap

  Meta-Analysis of Significance Values

• dep: r-cran-pbapply

  GNU R package providing progress bars for vectorized R functions

• dep: r-cran-plotly

  create interactive web graphics via 'plotly.js' in GNU R

• dep: r-cran-png

  GNU R package to read and write PNG images

• dep: r-cran-rann

  Fast Nearest Neighbour Search Using L2 Metric

• dep: r-cran-rcolorbrewer

  GNU R package providing suitable color palettes

• dep: r-cran-rcpp (>= 0.11.0)

  GNU R package for Seamless R and C++ Integration

• dep: r-cran-rcppannoy

  Rcpp bindings for Annoy (approximate nearest neighbors)

• dep: r-cran-rcppeigen

  GNU R package for Eigen templated linear algebra

• dep: r-cran-rcppprogress

  interruptible progress bar for C++ in GNU R packages

• dep: r-cran-reticulate

  R interface to Python modules, classes, and functions

• dep: r-cran-rlang

  Functions for Base Types and Core R and 'Tidyverse' Features

• dep: r-cran-rocr

  GNU R package to prepare and display ROC curves

• dep: r-cran-rsvd

  Randomized Singular Value Decomposition

• dep: r-cran-rtsne

  GNU R T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut

• dep: r-cran-scales

  Scale functions for visualization

• dep: r-cran-sctransform (>= 0.2.0)

  Variance Stabilizing Transformations for Single Cell UMI Data

• dep: r-cran-tsne

  t-distributed stochastic neighbor embedding for R (t-SNE)

• dep: r-cran-uwot (>= 0.1.5)

  GNU R uniform manifold approximation and projection (UMAP)

• rec: r-cran-testthat

  GNU R testsuite

• sug: r-bioc-biobase

  base functions for Bioconductor

• sug: r-bioc-biocgenerics

  generic functions for Bioconductor

• sug: r-bioc-deseq2

  R package for RNA-Seq Differential Expression Analysis

• sug: r-bioc-genomeinfodb

  BioConductor utilities for manipulating chromosome identifiers

• sug: r-bioc-genomicranges

  BioConductor representation and manipulation of genomic intervals

• sug: r-bioc-iranges

  GNU R low-level containers for storing sets of integer ranges

• sug: r-bioc-rtracklayer

  GNU R interface to genome browsers and their annotation tracks

• sug: r-bioc-s4vectors

  BioConductor S4 implementation of vectors and lists

• sug: r-bioc-summarizedexperiment

  BioConductor assay container

• sug: r-cran-sdmtools

  Species Distribution Modelling Tools

• sug: r-cran-vgam

  GNU R package for estimating vector generalized additive models

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