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Pakket: kleborate-examples (1.0.0-3)

Verwijzigingen voor kleborate-examples

kleborate-examples

Trisquel bronnen:

Het bronpakket kleborate downloaden:

Beheerder:

Original Maintainers:

  • Debian Med Packaging Team (Mailarchief)
  • Andreas Tille

Externe bronnen:

Vergelijkbare pakketten:

tool to screen Klebsiella genome assemblies (example data)

Kleborate is a tool to screen Klebsiella genome assemblies for: 

 * MLST sequence type
 * species (e.g. K. pneumoniae, K. quasipneumoniae, K. variicola, etc.)
 * ICEKp associated virulence loci: yersiniabactin (ybt),
   colibactin (clb)
 * virulence plasmid associated loci: salmochelin (iro), aerobactin
   (iuc), hypermucoidy (rmpA, rmpA2)
 * antimicrobial resistance genes, including quinolone resistance SNPs
   and colistin resistance truncations
 * K (capsule) and O antigen (LPS) serotype prediction, via wzi alleles
   and Kaptive

This package provides example data end tests that are used in autopkgtest.

Andere aan kleborate-examples gerelateerde pakketten

  • depends
  • recommends
  • suggests
  • rec: kleborate
    tool to screen Klebsiella genome assemblies

kleborate-examples downloaden

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