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[ Bron: openms ]
Pakket: topp (2.6.0+cleaned1-3build1)
Verwijzigingen voor topp
Trisquel bronnen:
Het bronpakket openms downloaden:
- [openms_2.6.0+cleaned1-3build1.dsc]
- [openms_2.6.0+cleaned1.orig.tar.gz]
- [openms_2.6.0+cleaned1-3build1.debian.tar.xz]
Beheerder:
Original Maintainers:
- The Debichem Group (Mailarchief)
- Filippo Rusconi
Externe bronnen:
- Homepage [www.openms.de]
Vergelijkbare pakketten:
set of programs implementing The OpenMS Proteomic Pipeline
TOPP (the OpenMS proteomic pipeline) is a pipeline for the analysis of HPLC/MS data. It consists of a set of numerous small applications that can be chained together to create analysis pipelines tailored for a specific problem. The applications make use of the libopenms library. Some examples of these applications are :
- TOPPView: A viewer for mass spectrometry data.
- TOPPAS: An assistant for GUI-driven TOPP workflow design.
- DTAExtractor: Extracts spectra of an MS run file to several
files in DTA format.
- FileConverter: Converts between different MS file formats.
- FileFilter: Extracts or manipulates portions of data from peak,
feature or consensus feature files.
- SpectraMerger: Merges spectra from an LC/MS map, either by
precursor or by RT blocks.
- BaselineFilter: Removes the baseline from profile spectra using a
top-hat filter.
- InternalCalibration: Applies an internal calibration.
- PTModel: Trains a model for the prediction of proteotypic
peptides from a training set.
- RTPredict: Predicts retention times for peptides using a model
trained by RTModel.
- ExecutePipeline: Executes workflows created by TOPPAS.
Andere aan topp gerelateerde pakketten
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-
- dep: libboost-regex1.74.0-icu70
- virtueel pakket geboden door libboost-regex1.74.0
-
- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
Ook een virtueel pakket geboden door: libc6-udeb
-
- dep: libgcc-s1 (>= 3.0)
- GCC support library
-
- dep: libgomp1 (>= 6)
- GCC OpenMP (GOMP) support library
-
- dep: libopenms2.6.0 (= 2.6.0+cleaned1-3build1)
- library for LC/MS data management and analysis - runtime
-
- dep: libqt5core5a (>= 5.11.3) [niet amd64]
- Qt 5 core module
- dep: libqt5core5a (>= 5.15.1) [amd64]
-
- dep: libqt5gui5 (>= 5.11.3)
- Qt 5 GUI module
- of libqt5gui5-gles (>= 5.11.3)
- Qt 5 GUI module — OpenGL ES variant
-
- dep: libqt5widgets5 (>= 5.11.3)
- Qt 5 widgets module
-
- dep: libstdc++6 (>= 11)
- GNU Standard C++ Library v3
-
- dep: libxerces-c3.2
- validating XML parser library for C++
-
- dep: openms-common (= 2.6.0+cleaned1-3build1)
- package for LC/MS data management and analysis - shared data
-
- sug: openms-doc
- package for LC/MS data management and analysis - documentation