Paket: topp (2.6.0+cleaned1-3build1)

Links für topp

Trisquel-Ressourcen:

Quellcode-Paket openms herunterladen:

Betreuer:

The Debichem Group (E-Mail-Archiv)

Original Maintainers:

The Debichem Group (E-Mail-Archiv)
Filippo Rusconi

Externe Ressourcen:

Homepage [www.openms.de]

set of programs implementing The OpenMS Proteomic Pipeline

TOPP (the OpenMS proteomic pipeline) is a pipeline for the analysis of HPLC/MS data. It consists of a set of numerous small applications that can be chained together to create analysis pipelines tailored for a specific problem. The applications make use of the libopenms library. Some examples of these applications are :

  - TOPPView: A viewer for mass spectrometry data.
  - TOPPAS: An assistant for GUI-driven TOPP workflow design.
  - DTAExtractor: Extracts spectra of an MS run file to several
    files in DTA format.
  - FileConverter:  Converts between different MS file formats.
  - FileFilter: Extracts or manipulates portions of data from peak,
    feature or consensus feature files.
  - SpectraMerger: Merges spectra from an LC/MS map, either by
    precursor or by RT blocks.
  - BaselineFilter: Removes the baseline from profile spectra using a
    top-hat filter.
  - InternalCalibration: Applies an internal calibration.
  - PTModel: Trains a model for the prediction of proteotypic
    peptides from a training set.
  - RTPredict: Predicts retention times for peptides using a model
    trained by RTModel.
  - ExecutePipeline: Executes workflows created by TOPPAS.

Andere Pakete mit Bezug zu topp

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dep: libboost-regex1.74.0-icu70

virtuelles Paket, bereitgestellt durch libboost-regex1.74.0
dep: libc6 (>= 2.34)

GNU C Library: Shared libraries
auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
dep: libgcc-s1 (>= 3.0)

GCC support library
dep: libgomp1 (>= 6)

GCC OpenMP (GOMP) support library
dep: libopenms2.6.0 (= 2.6.0+cleaned1-3build1)

library for LC/MS data management and analysis - runtime
dep: libqt5core5a (>= 5.11.3) [nicht amd64]

Qt 5 core module

dep: libqt5core5a (>= 5.15.1) [amd64]
dep: libqt5gui5 (>= 5.11.3)

Qt 5 GUI module

oder libqt5gui5-gles (>= 5.11.3)

Qt 5 GUI module — OpenGL ES variant
dep: libqt5widgets5 (>= 5.11.3)

Qt 5 widgets module
dep: libstdc++6 (>= 11)

GNU Standard C++ Library v3
dep: libxerces-c3.2

validating XML parser library for C++
dep: openms-common (= 2.6.0+cleaned1-3build1)

package for LC/MS data management and analysis - shared data

sug: openms-doc

package for LC/MS data management and analysis - documentation

topp herunterladen

Download für alle verfügbaren Architekturen
Architektur	Paketgröße	Größe (installiert)	Dateien
amd64	3.359,7 kB	17986 kB	[Liste der Dateien]
arm64	3.170,8 kB	15506 kB	[Liste der Dateien]
ppc64el	3.518,4 kB	23766 kB	[Liste der Dateien]

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