[ ソース: gasic ]
パッケージ: gasic (0.0.r19-7)
gasic に関するリンク
Trisquel の資源:
gasic ソースパッケージをダウンロード:
メンテナ:
Original Maintainers:
- Debian Med Packaging Team (メールアーカイブ)
- Andreas Tille
- Navid Fehrenbacher
- Roland Fehrenbacher
外部の資源:
- ホームページ [sourceforge.net]
類似のパッケージ:
genome abundance similarity correction
One goal of sequencing based metagenomic analysis is the quantitative taxonomic assessment of microbial community compositions. However, the majority of approaches either quantify at low resolution (e.g. at phylum level) or have severe problems discerning highly similar species. Yet, accurate quantification on species level is desirable in applications such as metagenomic diagnostics or community comparison. GASiC is a method to correct read alignment results for the ambiguities imposed by similarities of genomes. It has superior performance over existing methods.
その他の gasic 関連パッケージ
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- interactive high-level object-oriented language (default python3 version)
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- dep: python3-biopython
- Python3 library for bioinformatics
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- dep: python3-matplotlib
- Python based plotting system in a style similar to Matlab (Python 3)
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- Fast array facility to the Python 3 language
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- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
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- dep: python3-scipy
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- dep: seqan-apps
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- sug: gasic-examples
- genome abundance similarity correction (example data)