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[ Paquet source : bio-vcf ]
Paquet : bio-vcf (0.9.5-3)
Liens pour bio-vcf
Ressources Trisquel :
Télécharger le paquet source bio-vcf :
Responsable :
Original Maintainers:
- Debian Med Packaging Team (Archive du courrier électronique)
- Andreas Tille
- Nilesh Patra
Ressources externes :
- Page d'accueil [github.com]
Paquets similaires :
domain specific language (DSL) for processing the VCF format
Bio-vcf provides a domain specific language (DSL) for processing the VCF format. Record named fields can be queried with regular expressions, e.g.
sample.dp>20 and rec.filter !~ /LowQD/ and rec.tumor.bcount[rec.alt]>4
Bio-vcf is a new generation VCF parser, filter and converter. Bio-vcf is not only very fast for genome-wide (WGS) data, it also comes with a really nice filtering, evaluation and rewrite language and it can output any type of textual data, including VCF header and contents in RDF and JSON.
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Télécharger bio-vcf
| Architecture | Taille du paquet | Espace occupé une fois installé | Fichiers |
|---|---|---|---|
| all | 29,2 ko | 141 ko | [liste des fichiers] |