[ aramo ]
[ Quellcode: bio-vcf ]
Paket: bio-vcf (0.9.5-3)
Links für bio-vcf
Trisquel-Ressourcen:
Quellcode-Paket bio-vcf herunterladen:
Betreuer:
Original Maintainers:
- Debian Med Packaging Team (E-Mail-Archiv)
- Andreas Tille
- Nilesh Patra
Externe Ressourcen:
- Homepage [github.com]
Ähnliche Pakete:
domain specific language (DSL) for processing the VCF format
Bio-vcf provides a domain specific language (DSL) for processing the VCF format. Record named fields can be queried with regular expressions, e.g.
sample.dp>20 and rec.filter !~ /LowQD/ and rec.tumor.bcount[rec.alt]>4
Bio-vcf is a new generation VCF parser, filter and converter. Bio-vcf is not only very fast for genome-wide (WGS) data, it also comes with a really nice filtering, evaluation and rewrite language and it can output any type of textual data, including VCF header and contents in RDF and JSON.
Andere Pakete mit Bezug zu bio-vcf
|
|
|
-
- dep: ruby
- Interpreter of object-oriented scripting language Ruby (default version)
bio-vcf herunterladen
| Architektur | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|
| all | 29,2 kB | 141 kB | [Liste der Dateien] |