[ nabia ]
[ aramo ]
[ Source: plink2 ]
Package: plink2 (2.00~a3-220218+dfsg-1)
Links for plink2
Trisquel Resources:
Download Source Package plink2:
- [plink2_2.00~a3-220218+dfsg-1.dsc]
- [plink2_2.00~a3-220218+dfsg.orig.tar.xz]
- [plink2_2.00~a3-220218+dfsg-1.debian.tar.xz]
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Dylan Aïssi
External Resources:
- Homepage [www.cog-genomics.org]
Similar packages:
whole-genome association analysis toolset
plink expects as input the data from SNP (single nucleotide polymorphism) chips of many individuals and their phenotypical description of a disease. It finds associations of single or pairs of DNA variations with a phenotype and can retrieve SNP annotation from an online source.
SNPs can evaluated individually or as pairs for their association with the disease phenotypes. The joint investigation of copy number variations is supported. A variety of statistical tests have been implemented.
plink2 is a comprehensive update of plink and plink1.9 with new algorithms and new methods, faster and less memory consumer than the first plink.
Other Packages Related to plink2
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- dep: libatlas3-base [not armhf]
- Automatically Tuned Linear Algebra Software, generic shared
-
- dep: libblas3
- Basic Linear Algebra Reference implementations, shared library
- or libblas.so.3
- virtual package provided by libatlas3-base, libblas3, libblis3-openmp, libblis3-pthread, libblis3-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
-
- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
-
- dep: libdeflate0 (>= 1.0)
- fast, whole-buffer DEFLATE-based compression and decompression
-
- dep: libgcc-s1 (>= 3.5) [armhf]
- GCC support library
-
- dep: liblapack3
- Library of linear algebra routines 3 - shared version
- or liblapack.so.3
- virtual package provided by libatlas3-base, liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
-
- dep: libstdc++6 (>= 4.1.1) [armhf]
- GNU Standard C++ Library v3
-
- dep: libzstd1 (>= 1.4.0)
- fast lossless compression algorithm
-
- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
Download plink2
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 2,108.2 kB | 13059 kB | [list of files] |
| arm64 | 921.5 kB | 1956 kB | [list of files] |
| armhf | 884.3 kB | 1690 kB | [list of files] |
| ppc64el | 1,056.9 kB | 2448 kB | [list of files] |