Paket: mauve-aligner (2.4.0+4734-3)
Links für mauve-aligner
Trisquel-Ressourcen:
Quellcode-Paket mauve-aligner herunterladen:
- [mauve-aligner_2.4.0+4734-3.dsc]
- [mauve-aligner_2.4.0+4734.orig.tar.xz]
- [mauve-aligner_2.4.0+4734-3.debian.tar.xz]
Betreuer:
Original Maintainers:
- Debian Med Packaging Team (E-Mail-Archiv)
- Andreas Tille
- Afif Elghraoui
Externe Ressourcen:
- Homepage [darlinglab.org]
Ähnliche Pakete:
multiple genome alignment
Mauve is a system for efficiently constructing multiple genome alignments in the presence of large-scale evolutionary events such as rearrangement and inversion. Multiple genome alignment provides a basis for research into comparative genomics and the study of evolutionary dynamics. Aligning whole genomes is a fundamentally different problem than aligning short sequences.
Mauve has been developed with the idea that a multiple genome aligner should require only modest computational resources. It employs algorithmic techniques that scale well in the amount of sequence being aligned. For example, a pair of Y. pestis genomes can be aligned in under a minute, while a group of 9 divergent Enterobacterial genomes can be aligned in a few hours.
Mauve computes and interactively visualizes genome sequence comparisons. Using FastA or GenBank sequence data, Mauve constructs multiple genome alignments that identify large-scale rearrangement, gene gain, gene loss, indels, and nucleotide substutition.
Mauve is developed at the University of Wisconsin.
Andere Pakete mit Bezug zu mauve-aligner
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- dep: java-wrappers
- wrappers for java executables
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- dep: libbiojava-java
- Java API to biological data and applications (default version)
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- dep: libbiojava1.7-java
- Java API to biological data and applications (version 1.7)
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- dep: libdbus-java
- simple interprocess messaging system (Java implementation)
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- dep: libunixsocket-java
- Unix socket API and bindings for Java
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- dep: libzeus-jscl-java
- Zeus Java Swing Components Library
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- dep: progressivemauve
- multiple genome alignment algorithms
mauve-aligner herunterladen
| Architektur | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|
| amd64 | 481,6 kB | 546 kB | [Liste der Dateien] |
| i386 | 481,5 kB | 546 kB | [Liste der Dateien] |