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Pakket: mauve-aligner (2.4.0+4734-3)

Verwijzigingen voor mauve-aligner

mauve-aligner

Trisquel bronnen:

Het bronpakket mauve-aligner downloaden:

Beheerder:

Original Maintainers:

  • Debian Med Packaging Team (Mailarchief)
  • Andreas Tille
  • Afif Elghraoui

Externe bronnen:

Vergelijkbare pakketten:

multiple genome alignment

Mauve is a system for efficiently constructing multiple genome alignments in the presence of large-scale evolutionary events such as rearrangement and inversion. Multiple genome alignment provides a basis for research into comparative genomics and the study of evolutionary dynamics. Aligning whole genomes is a fundamentally different problem than aligning short sequences.

Mauve has been developed with the idea that a multiple genome aligner should require only modest computational resources. It employs algorithmic techniques that scale well in the amount of sequence being aligned. For example, a pair of Y. pestis genomes can be aligned in under a minute, while a group of 9 divergent Enterobacterial genomes can be aligned in a few hours.

Mauve computes and interactively visualizes genome sequence comparisons. Using FastA or GenBank sequence data, Mauve constructs multiple genome alignments that identify large-scale rearrangement, gene gain, gene loss, indels, and nucleotide substutition.

Mauve is developed at the University of Wisconsin.

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Pakket downloaden voor alle beschikbare platforms
Platform Pakketgrootte Geïnstalleerde grootte Bestanden
amd64 481,6 kB546 kB [overzicht]
i386 481,5 kB546 kB [overzicht]