[ Quellcode: canu ]
Paket: canu (1.6+dfsg-2)
Links für canu
Trisquel-Ressourcen:
Quellcode-Paket canu herunterladen:
Betreuer:
Original Maintainers:
- Debian Med Packaging Team (E-Mail-Archiv)
- Afif Elghraoui
Externe Ressourcen:
- Homepage [canu.readthedocs.org]
Ähnliche Pakete:
single molecule sequence assembler for genomes
Canu is a fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio RS II or Oxford Nanopore MinION).
Canu is a hierarchical assembly pipeline which runs in four steps:
* Detect overlaps in high-noise sequences using MHAP * Generate corrected sequence consensus * Trim corrected sequences * Assemble trimmed corrected sequences
Andere Pakete mit Bezug zu canu
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- dep: libc6 (>= 2.14)
- GNU C Library: Shared libraries
auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
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- dep: libfilesys-df-perl
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- dep: libgcc1 (>= 1:3.0)
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- dep: libgomp1 (>= 4.9)
- GCC OpenMP (GOMP) support library
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
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- dep: mhap (>= 2.1)
- locality-sensitive hashing to detect long-read overlaps
-
- dep: perl
- Larry Wall's Practical Extraction and Report Language
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- rec: gnuplot
- Command-line driven interactive plotting program.
auch ein virtuelles Paket, bereitgestellt durch gnuplot-nox, gnuplot-qt, gnuplot-x11
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- sug: nanopolish
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- sug: pbgenomicconsensus
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canu herunterladen
| Architektur | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|
| amd64 | 1.846,7 kB | 11664 kB | [Liste der Dateien] |