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Пакет: bali-phy (3.6.1+dfsg-1)

Връзки за bali-phy

bali-phy

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Изтегляне на пакет-източник bali-phy.

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Подобни пакети:

Bayesian Inference of Alignment and Phylogeny

BAli-Phy estimates multiple sequence alignments and evolutionary trees from unaligned DNA, amino acid, or codon sequences. BAli-Phy uses MCMC to estimate evolutionary trees, positive selection, and branch lengths while averaging over alternative alignments. BAli-Phy can display alignment ambiguity graphically in an alignment uncertainty (AU) plot.

BAli-Phy can also estimate phylogenies from a fixed alignment (like MrBayes and BEAST) using substitution models like GTR+gamma. BAli-Phy automatically estimates relative rates for each gene.

Други пакети, свързани с bali-phy

  • зависимости
  • препоръчани
  • предложени
  • dep: libboost-chrono1.74.0 (>= 1.74.0)
    C++ representation of time duration, time point, and clocks
  • dep: libboost-filesystem1.74.0 (>= 1.74.0)
    filesystem operations (portable paths, iteration over directories, etc) in C++
  • dep: libboost-program-options1.74.0 (>= 1.74.0)
    program options library for C++
  • dep: libboost-random1.74.0 (>= 1.74.0)
    Boost Random Number Library
  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    също и виртуален пакет, предлаган от libc6-udeb
  • dep: libcairo2 (>= 1.4.10)
    Cairo 2D vector graphics library
  • dep: libgcc-s1 (>= 4.5)
    GCC support library
  • dep: libstdc++6 (>= 11)
    GNU Standard C++ Library v3
  • dep: perl
    Larry Wall's Practical Extraction and Report Language
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
  • rec: gnuplot
    Command-line driven interactive plotting program.
    също и виртуален пакет, предлаган от gnuplot-nox, gnuplot-qt, gnuplot-x11
  • rec: r-base
    GNU R statistical computation and graphics system
  • sug: figtree
    graphical phylogenetic tree viewer
  • sug: seaview
    Пакетът не е наличен

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