[ 原始碼： prime-phylo ]
套件： prime-phylo (1.0.11-8build1)
prime-phylo 的相關超連結
Trisquel 的資源：
下載原始碼套件 prime-phylo：
- [prime-phylo_1.0.11-8build1.dsc]
- [prime-phylo_1.0.11.orig.tar.gz]
- [prime-phylo_1.0.11-8build1.debian.tar.xz]
維護者：
Original Maintainers:
- Debian Med Packaging Team (郵件存檔)
- Erik Sjolund
- Andreas Tille
外部的資源：
- 主頁 [prime.sbc.su.se]
相似套件：
bayesian estimation of gene trees taking the species tree into account
PrIME (Probabilistic Integrated Models of Evolution) is a package supporting inference of evolutionary parameters in a Bayesian framework using Markov chain Monte Carlo simulation. A distinguishing feature of PrIME is that the species tree is taken into account when analyzing gene trees.
The input data to PrIME is a multiple sequence alignment in FASTA format and the output data contains trees in Newick format.
其他與 prime-phylo 有關的套件
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- dep: libblas3
- Basic Linear Algebra Reference implementations, shared library
- 或者 libblas.so.3
- 本虛擬套件由這些套件提供： libatlas3-base, libblas3, libblis3-openmp, libblis3-pthread, libblis3-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
-
- dep: libboost-mpi1.71.0
- C++ interface to the Message Passing Interface (MPI)
-
- dep: libboost-serialization1.71.0
- serialization library for C++
-
- dep: libc6 (>= 2.29)
- GNU C Library: Shared libraries
同時作為一個虛擬套件由這些套件提供： libc6-udeb
-
- dep: libgcc-s1 (>= 3.0) [amd64]
- GCC support library
- dep: libgcc-s1 (>= 3.5) [armhf]
-
- dep: liblapack3
- Library of linear algebra routines 3 - shared version
- 或者 liblapack.so.3
- 本虛擬套件由這些套件提供： libatlas3-base, liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
-
- dep: libopenmpi3 (>= 4.0.2)
- high performance message passing library -- shared library
-
- dep: libstdc++6 (>= 9)
- GNU Standard C++ Library v3
-
- dep: libxml2 (>= 2.7.4)
- GNOME XML library
-
- dep: perl
- Larry Wall's Practical Extraction and Report Language
-
- sug: mafft
- Multiple alignment program for amino acid or nucleotide sequences
-
- sug: mrbayes
- Bayesian Inference of Phylogeny
-
- sug: muscle
- Multiple alignment program of protein sequences
-
- sug: njplot
- phylogenetic tree drawing program
-
- sug: phyml
- Phylogenetic estimation using Maximum Likelihood
-
- sug: probalign
- multiple sequence alignment using partition function posterior probabilities
-
- sug: python3-biopython
- Python3 library for bioinformatics
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- sug: raxml
- Randomized Axelerated Maximum Likelihood of phylogenetic trees
-
- sug: treeviewx
- Displays and prints phylogenetic trees