[ 原始碼： r-bioc-genomicalignments ]
套件： r-bioc-genomicalignments (1.22.1-1)
r-bioc-genomicalignments 的相關超連結
Trisquel 的資源：
下載原始碼套件 r-bioc-genomicalignments：
- [r-bioc-genomicalignments_1.22.1-1.dsc]
- [r-bioc-genomicalignments_1.22.1.orig.tar.gz]
- [r-bioc-genomicalignments_1.22.1-1.debian.tar.xz]
維護者：
Original Maintainers:
- Debian R Packages Maintainers
- Andreas Tille
外部的資源：
- 主頁 [bioconductor.org]
相似套件：
BioConductor representation and manipulation of short genomic alignments
This BioConductor package provides efficient containers for storing and manipulating short genomic alignments (typically obtained by aligning short reads to a reference genome). This includes read counting, computing the coverage, junction detection, and working with the nucleotide content of the alignments.
其他與 r-bioc-genomicalignments 有關的套件
|
|
|
-
- dep: libc6 (>= 2.4)
- GNU C Library: Shared libraries
同時作為一個虛擬套件由這些套件提供： libc6-udeb
-
- dep: r-api-3.5
- 本虛擬套件由這些套件提供： r-base-core
-
- dep: r-api-bioc-3.10
- 本虛擬套件由這些套件提供： r-bioc-biocgenerics
-
- dep: r-base-core (>= 3.6.1-7)
- GNU R core of statistical computation and graphics system
-
- dep: r-bioc-biocgenerics (>= 0.15.3)
- generic functions for Bioconductor
-
- dep: r-bioc-biocparallel
- BioConductor facilities for parallel evaluation
-
- dep: r-bioc-biostrings (>= 2.47.6)
- GNU R string objects representing biological sequences
-
- dep: r-bioc-genomeinfodb (>= 1.13.1)
- BioConductor utilities for manipulating chromosome identifiers
-
- dep: r-bioc-genomicranges (>= 1.37.2)
- BioConductor representation and manipulation of genomic intervals
-
- dep: r-bioc-iranges (>= 2.15.12)
- GNU R low-level containers for storing sets of integer ranges
-
- dep: r-bioc-rsamtools (>= 1.31.2)
- GNU R binary alignment (BAM), variant call (BCF), or tabix file import
-
- dep: r-bioc-s4vectors (>= 0.23.19)
- BioConductor S4 implementation of vectors and lists
-
- dep: r-bioc-summarizedexperiment (>= 1.9.13)
- BioConductor assay container
-
- rec: r-bioc-shortread (>= 1.24.0)
- GNU R classes and methods for high-throughput short-read sequencing data
-
- rec: r-cran-runit
- GNU R package providing unit testing framework
-
- sug: r-bioc-bsgenome
- BioConductor infrastructure for Biostrings-based genome data packages
-
- sug: r-bioc-deseq2
- R package for RNA-Seq Differential Expression Analysis
-
- sug: r-bioc-genomicfeatures
- GNU R tools for making and manipulating transcript centric annotations
-
- sug: r-bioc-rtracklayer
- GNU R interface to genome browsers and their annotation tracks