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[ 原始碼: mash  ]

套件: mash (2.2.2+dfsg-1build1)

mash 的相關超連結

mash

Trisquel 的資源:

下載原始碼套件 mash

維護者:

Original Maintainers:

外部的資源:

  • 主頁 [mash.readthedocs.io]

相似套件:

fast genome and metagenome distance estimation using MinHash

Mash uses MinHash locality-sensitive hashing to reduce large biosequences to a representative sketch and rapidly estimate pairwise distances between genomes or metagenomes. Mash sketch databases effectively delineate known species boundaries, allow construction of approximate phylogenies, and can be searched in seconds using assembled genomes or raw sequencing runs from Illumina, Pacific Biosciences, and Oxford Nanopore. For metagenomics, Mash scales to thousands of samples and can replicate Human Microbiome Project and Global Ocean Survey results in a fraction of the time.

其他與 mash 有關的套件

  • 依賴
  • 推薦
  • 建議
  • dep: libc6 (>= 2.29)
    GNU C Library: Shared libraries
    同時作為一個虛擬套件由這些套件提供: libc6-udeb
  • dep: libcapnp-0.7.0
    Cap'n Proto C++ library
  • dep: libgcc-s1 (>= 3.0)
    GCC support library
  • dep: libgsl23 (>= 2.5)
    GNU Scientific Library (GSL) -- library package
  • dep: libmurmurhash2 (>= 0.2)
    Portable MurmurHash Implementation
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3
  • dep: zlib1g (>= 1:1.1.4)
    compression library - runtime

下載 mash

下載可用於所有硬體架構的
硬體架構 套件大小 安裝後大小 檔案
amd64 150.4 kB447 kB [文件列表]