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[ 原始碼: r-cran-adegenet  ]

套件: r-cran-adegenet (2.1.5-1)

GNU R exploratory analysis of genetic and genomic data

Toolset for the exploration of genetic and genomic data. Adegenet provides formal (S4) classes for storing and handling various genetic data, including genetic markers with varying ploidy and hierarchical population structure ('genind' class), alleles counts by populations ('genpop'), and genome-wide SNP data ('genlight'). It also implements original multivariate methods (DAPC, sPCA), graphics, statistical tests, simulation tools, distance and similarity measures, and several spatial methods. A range of both empirical and simulated datasets is also provided to illustrate various methods.

其他與 r-cran-adegenet 有關的套件

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  • dep: libc6 (>= 2.17) [arm64, ppc64el]
    GNU C Library: Shared libraries
    同時作為一個虛擬套件由這些套件提供: libc6-udeb
    dep: libc6 (>= 2.4) [amd64, armhf]
  • dep: r-api-4.0
    本虛擬套件由這些套件提供: r-base-core
  • dep: r-base-core (>= 4.1.1-2)
    GNU R core of statistical computation and graphics system
  • dep: r-cran-ade4
    GNU R analysis of ecological data
  • dep: r-cran-ape
    GNU R package for Analyses of Phylogenetics and Evolution
  • dep: r-cran-boot
    GNU R package for bootstrapping functions from Davison and Hinkley
  • dep: r-cran-dplyr (>= 0.4.1)
    GNU R grammar of data manipulation
  • dep: r-cran-ggplot2
    implementation of the Grammar of Graphics
  • dep: r-cran-igraph
    GNU R network analysis and visualization
  • dep: r-cran-mass
    GNU R package of Venables and Ripley's MASS
  • dep: r-cran-reshape2
    Flexibly reshape data: a reboot of the reshape package
  • dep: r-cran-seqinr
    GNU R biological sequences retrieval and analysis
  • dep: r-cran-shiny
    GNU R web application framework
  • dep: r-cran-vegan
    Community Ecology Package for R
  • sug: r-cran-maps
    GNU R support for producing geographic maps
  • sug: r-cran-spdep
    GNU R spatial dependence: weighting schemes, statistics and models

下載 r-cran-adegenet

下載可用於所有硬體架構的
硬體架構 套件大小 安裝後大小 檔案
amd64 2,670.0 kB4814 kB [文件列表]
arm64 2,669.6 kB4806 kB [文件列表]
armhf 2,668.2 kB4797 kB [文件列表]
ppc64el 2,676.9 kB4842 kB [文件列表]