软件包: libfreecontact-perl (0.08-7build2)
libfreecontact-perl 的相关链接
Trisquel 的资源:
下载源码包 libfreecontact-perl:
- [libfreecontact-perl_0.08-7build2.dsc]
- [libfreecontact-perl_0.08.orig.tar.gz]
- [libfreecontact-perl_0.08-7build2.debian.tar.xz]
维护者:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Laszlo Kajan
- Andreas Tille
外部的资源:
- 主页 [rostlab.org]
相似软件包:
fast protein contact predictor - binding for Perl
FreeContact is a protein residue contact predictor optimized for speed. Its input is a multiple sequence alignment. FreeContact can function as an accelerated drop-in for the published contact predictors EVfold-mfDCA of DS. Marks (2011) and PSICOV of D. Jones (2011).
FreeContact is accelerated by a combination of vector instructions, multiple threads, and faster implementation of key parts. Depending on the alignment, 8-fold or higher speedups are possible.
A sufficiently large alignment is required for meaningful results. As a minimum, an alignment with an effective (after-weighting) sequence count bigger than the length of the query sequence should be used. Alignments with tens of thousands of (effective) sequences are considered good input.
jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite can be used to generate the alignments, for example.
This package contains the Perl binding.
其他与 libfreecontact-perl 有关的软件包
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- dep: libc6 (>= 2.14) [amd64]
- GNU C Library: Shared libraries
同时作为一个虚包由这些包填实: libc6-udeb
- dep: libc6 (>= 2.4) [armhf]
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- dep: libfreecontact0v5
- fast protein contact predictor library
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- dep: libgcc-s1 (>= 3.0) [amd64]
- GCC support library
- dep: libgcc-s1 (>= 3.5) [armhf]
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- dep: perl (>= 5.30.0-9build1)
- Larry Wall's Practical Extraction and Report Language
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- dep: perlapi-5.30.0
- 本虚包由这些包填实: perl-base