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[ 源代码: phast  ]

软件包: phast (1.4+dfsg-1)

phylogenetic analysis with space/time models

PHAST is a software package for comparative and evolutionary genomics. It consists of about half a dozen major programs, plus more than a dozen utilities for manipulating sequence alignments, phylogenetic trees, and genomic annotations. For the most part, PHAST focuses on two kinds of applications: the identification of novel functional elements, including protein-coding exons and evolutionarily conserved sequences; and statistical phylogenetic modeling, including estimation of model parameters, detection of signatures of selection, and reconstruction of ancestral sequences.

PHAST does not support phylogeny reconstruction or sequence alignment, and it is designed for use with DNA sequences only (see Comparison).

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硬件架构 软件包大小 安装后大小 文件
amd64 2,225.0 kB29106 kB [文件列表]
i386 2,276.9 kB30336 kB [文件列表]