[ 源代码: exonerate ]
软件包: exonerate (2.4.0-5)
exonerate 的相关链接
Trisquel 的资源:
下载源码包 exonerate:
维护者:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Steffen Moeller
- Charles Plessy
- Andreas Tille
外部的资源:
- 主页 [www.ebi.ac.uk]
相似软件包:
generic tool for pairwise sequence comparison
Exonerate allows you to align sequences using a many alignment models, using either exhaustive dynamic programming, or a variety of heuristics. Much of the functionality of the Wise dynamic programming suite was reimplemented in C for better efficiency. Exonerate is an intrinsic component of the building of the Ensembl genome databases, providing similarity scores between RNA and DNA sequences and thus determining splice variants and coding sequences in general.
An In-silico PCR Experiment Simulation System (see the ipcress man page) is packaged with exonerate.
This package also comes with a selection of utilities for performing simple manipulations quickly on fasta files beyond 2Gb
其他与 exonerate 有关的软件包
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- dep: libc6 (>= 2.29)
- GNU C Library: Shared libraries
同时作为一个虚包由这些包填实: libc6-udeb
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- dep: libglib2.0-0 (>= 2.24.0)
- GLib library of C routines
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- sug: wise
- comparison of biopolymers, like DNA and protein sequences
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- enh: bioperl-run
- BioPerl wrappers: scripts