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[ 源代码: unifrac  ]

软件包: libssu-tools (0.10.0-3build1)

high-performance phylogenetic diversity calculations (binaries)

The de facto repository for high-performance phylogenetic diversity calculations. The methods in this repository are based on an implementation of the Strided State UniFrac algorithm which is faster, and uses less memory than Fast UniFrac. Strided State UniFrac supports Unweighted UniFrac, Weighted UniFrac, Generalized UniFrac, Variance Adjusted UniFrac and meta UniFrac. This repository also includes Stacked Faith (manuscript in preparation), a method for calculating Faith's PD that is faster and uses less memory than the Fast UniFrac-based reference implementation.

This package contains target binaries ssu and faithpd

其他与 libssu-tools 有关的软件包

  • 依赖
  • 推荐
  • 建议
  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    同时作为一个虚包由这些包填实: libc6-udeb
  • dep: libgcc-s1 (>= 4.2)
    GCC support library
  • dep: libssu0
    high-performance phylogenetic diversity calculations (lib)
  • dep: libstdc++6 (>= 11)
    GNU Standard C++ Library v3
  • dep: libsz2 (>= 1.0.6)
    Adaptive Entropy Coding library - SZIP
  • dep: zlib1g (>= 1:1.1.4)
    compression library - runtime

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