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[ 源代码: spoa  ]

软件包: libspoa-dev (4.0.7+ds-2)

SIMD partial order alignment library (development files)

Spoa (SIMD POA) is a c++ implementation of the partial order alignment (POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which is used to generate consensus sequences (as described in 10.1093/bioinformatics/btg109). It supports three alignment modes: local (Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment (overlap).

This package contains the static library and the header files.

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