Пакунок: chromhmm-example (1.20+dfsg-1)
Links for chromhmm-example
Trisquel Resources:
Download Source Package chromhmm:
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Dylan Aïssi
External Resources:
- Homepage [compbio.mit.edu]
Similar packages:
Chromatin state discovery and characterization (example)
ChromHMM is software for learning and characterizing chromatin states. ChromHMM can integrate multiple chromatin datasets such as ChIP-seq data of various histone modifications to discover de novo the major re-occuring combinatorial and spatial patterns of marks. ChromHMM is based on a multivariate Hidden Markov Model that explicitly models the presence or absence of each chromatin mark. The resulting model can then be used to systematically annotate a genome in one or more cell types. By automatically computing state enrichments for large-scale functional and annotation datasets ChromHMM facilitates the biological characterization of each state. ChromHMM also produces files with genome-wide maps of chromatin state annotations that can be directly visualized in a genome browser.
This package provides example to work with ChromHMM.
Інші пакунки пов'язані з chromhmm-example
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- enh: chromhmm
- Chromatin state discovery and characterization
Завантажити chromhmm-example
Архітектура | Розмір пакунка | Розмір після встановлення | Файли |
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all | 37,153.9 kB | 37363 kB | [список файлів] |