[ Source: gasic ]
Пакунок: gasic (0.0.r19-3)
Links for gasic
Trisquel Resources:
Download Source Package gasic:
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Andreas Tille
- Navid Fehrenbacher
- Roland Fehrenbacher
External Resources:
- Homepage [sourceforge.net]
Similar packages:
genome abundance similarity correction
One goal of sequencing based metagenomic analysis is the quantitative taxonomic assessment of microbial community compositions. However, the majority of approaches either quantify at low resolution (e.g. at phylum level) or have severe problems discerning highly similar species. Yet, accurate quantification on species level is desirable in applications such as metagenomic diagnostics or community comparison. GASiC is a method to correct read alignment results for the ambiguities imposed by similarities of genomes. It has superior performance over existing methods.
Інші пакунки пов'язані з gasic
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- dep: bowtie
- Ultrafast memory-efficient short read aligner
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- dep: bowtie2
- ultrafast memory-efficient short read aligner
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- dep: bwa
- Burrows-Wheeler Aligner
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- dep: python
- interactive high-level object-oriented language (default version)
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- dep: python-biopython
- Python library for bioinformatics (implemented in Python 2)
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- dep: python-matplotlib
- Python based plotting system in a style similar to Matlab
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- dep: python-numpy
- Numerical Python adds a fast array facility to the Python language
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- dep: python-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 2)
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- dep: python-scipy
- scientific tools for Python
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- dep: seqan-apps
- C++ library for the analysis of biological sequences
Завантажити gasic
| Архітектура | Розмір пакунка | Розмір після встановлення | Файли |
|---|---|---|---|
| amd64 | 19.8 kB | 74 kB | [список файлів] |