Skip to content
Sections
>> Trisquel >> Packages >> etiona >> science >> flexbar
etiona  ] [  nabia  ] [  aramo  ]
[ Source: flexbar  ]

Пакунок: flexbar (1:3.0.3-2)

flexible barcode and adapter removal for sequencing platforms

Flexbar preprocesses high-throughput sequencing data efficiently. It demultiplexes barcoded runs and removes adapter sequences. Moreover, trimming and filtering features are provided. Flexbar increases mapping rates and improves genome and transcriptome assemblies. It supports next-generation sequencing data in fasta/q and csfasta/q format from Illumina, Roche 454, and the SOLiD platform.

Parameter names changed in Flexbar. Please review scripts. The recent months, default settings were optimised, several bugs were fixed and various improvements were made, e.g. revamped command-line interface, new trimming modes as well as lower time and memory requirements.

Інші пакунки пов'язані з flexbar

  • depends
  • recommends
  • suggests
  • dep: libbz2-1.0
    high-quality block-sorting file compressor library - runtime
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
    dep: libc6 (>= 2.4) [i386]
  • dep: libgcc1 (>= 1:3.0) [amd64]
    GCC support library
    dep: libgcc1 (>= 1:4.2) [i386]
  • dep: libstdc++6 (>= 7)
    GNU Standard C++ Library v3
  • dep: libtbb2
    parallelism library for C++ - runtime files
  • dep: zlib1g (>= 1:1.1.4)
    compression library - runtime

Завантажити flexbar

Завантаження для всіх доступних архітектур
Архітектура Розмір пакунка Розмір після встановлення Файли
amd64 262.4 kB926 kB [список файлів]
i386 278.3 kB933 kB [список файлів]