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[ Källkod: pbalign ]
Paket: python-pbalign (0.3.0-1)
Länkar för python-pbalign
Trisquelresurser:
Hämta källkodspaketet pbalign:
Ansvarig:
Original Maintainers:
- Debian Med Packaging Team (E-postarkiv)
- Afif Elghraoui
Externa resurser:
- Hemsida [github.com]
Liknande paket:
map Pacific Biosciences reads to reference DNA sequences (Python2)
pbalign aligns PacBio reads to reference sequences, filters aligned reads according to user-specific filtering criteria, and converts the output to either the SAM format or PacBio Compare HDF5 (e.g., .cmp.h5) format.
pbalign is part of the SMRTAnalysis suite. This package provides the Python library backend.
Andra paket besläktade med python-pbalign
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- dep: blasr (>= 5.3+0)
- mapping single-molecule sequencing reads
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- dep: python
- interactive high-level object-oriented language (default version)
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- dep: python-pbcommand
- common command-line interface for Pacific Biosciences analysis modules
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- dep: python-pbcore
- Python library for processing PacBio data files
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- dep: python-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 2)
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- rec: hdf5-tools
- Hierarchical Data Format 5 (HDF5) - Runtime tools
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- rec: python-pbh5tools
- tools for manipulating Pacific Biosciences HDF5 files -- Python 2 library
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- sug: bowtie2
- ultrafast memory-efficient short read aligner
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- sug: gmap
- Paketet inte tillgängligt
-
- sug: pbalign-doc
- documentation for pbalign
Hämta python-pbalign
| Arkitektur | Paketstorlek | Installerad storlek | Filer |
|---|---|---|---|
| all | 36,3 kbyte | 225 kbyte | [filförteckning] |